|
Summary of Streptomyces coelicolor, Strain A3(2), version 5.0 |
Authors:
Veronica Armendarez, John Innes Centre
Govind Chandra, John Innes Centre
Mervyn Bibb, John Innes Centre
Citations: [
SRI05
,
Bentley04
,
Kanehisa97
,
Kanehisa00
,
Borodina05
,
Bentley02
]
| Replicon | Total Genes | Protein Genes | RNA Genes | Pseudogenes | Size (bp) |
| Chromosome | 7909 | 7827 | 82 | 58 | 8,667,507 |
| SCP1 | 356 | 356 | 0 | 5 | 356,073 |
| SCP2 | 34 | 34 | 0 | 0 | 31,317 |
| Total: | 8299 | 8217 | 82 | 63 | 9,054,897 |
| Pathways: | 239 |
| Enzymatic Reactions: | 1337 |
| Transport Reactions: | 26 |
| Polypeptides: | 8201 |
| Protein Complexes: | 38 |
| Enzymes: | 1241 |
| Transporters: | 56 |
| Compounds: | 1036 |
| Transcription Units: | 5994 |
| tRNAs: | 63 |
Unification Links: Taxonomy:1902
Bentley02: Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, James KD, Harris DE, Quail MA, Kieser H, Harper D, Bateman A, Brown S, Chandra G, Chen CW, Collins M, Cronin A, Fraser A, Goble A, Hidalgo J, Hornsby T, Howarth S, Huang CH, Kieser T, Larke L, Murphy L, Oliver K, O'Neil S, Rabbinowitsch E, Rajandream MA, Rutherford K, Rutter S, Seeger K, Saunders D, Sharp S, Squares R, Squares S, Taylor K, Warren T, Wietzorrek A, Woodward J, Barrell BG, Parkhill J, Hopwood DA (2002). "Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)." Nature 417(6885);141-7. PMID: 12000953
Bentley04: Bentley SD, Brown S, Murphy LD, Harris DE, Quail MA, Parkhill J, Barrell BG, McCormick JR, Santamaria RI, Losick R, Yamasaki M, Kinashi H, Chen CW, Chandra G, Jakimowicz D, Kieser HM, Kieser T, Chater KF (2004). "SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2)." Mol Microbiol 51(6);1615-28. PMID: 15009889
Borodina05: Borodina I, Krabben P, Nielsen J (2005). "Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism." Genome Res 15(6);820-9. PMID: 15930493
Kanehisa00: Kanehisa M, Goto S (2000). "KEGG: kyoto encyclopedia of genes and genomes." Nucleic Acids Res 28(1);27-30. PMID: 10592173
Kanehisa97: Kanehisa M (1997). "A database for post-genome analysis." Trends Genet 13(9);375-6. PMID: 9287494
SRI05: SRI International (2005). "BioCyc and Pathway Tools Publications." BioCyc Database Collection.
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