Summary of Streptomyces coelicolor, Strain A3(2), version 5.0

Authors:
Veronica Armendarez, John Innes Centre
Govind Chandra, John Innes Centre
Mervyn Bibb, John Innes Centre


Citations: [ SRI05 , Bentley04 , Kanehisa97 , Kanehisa00 , Borodina05 , Bentley02 ]

RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)
Chromosome7909782782588,667,507
SCP135635605356,073
SCP234340031,317
Total:8299821782639,054,897

Pathways:239
Enzymatic Reactions:1337
Transport Reactions:26
Polypeptides:8201
Protein Complexes:38
Enzymes:1241
Transporters:56
Compounds:1036
Transcription Units:5994
tRNAs:63

Unification Links: Taxonomy:1902


References

Bentley02: Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, James KD, Harris DE, Quail MA, Kieser H, Harper D, Bateman A, Brown S, Chandra G, Chen CW, Collins M, Cronin A, Fraser A, Goble A, Hidalgo J, Hornsby T, Howarth S, Huang CH, Kieser T, Larke L, Murphy L, Oliver K, O'Neil S, Rabbinowitsch E, Rajandream MA, Rutherford K, Rutter S, Seeger K, Saunders D, Sharp S, Squares R, Squares S, Taylor K, Warren T, Wietzorrek A, Woodward J, Barrell BG, Parkhill J, Hopwood DA (2002). "Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)." Nature 417(6885);141-7. PMID: 12000953

Bentley04: Bentley SD, Brown S, Murphy LD, Harris DE, Quail MA, Parkhill J, Barrell BG, McCormick JR, Santamaria RI, Losick R, Yamasaki M, Kinashi H, Chen CW, Chandra G, Jakimowicz D, Kieser HM, Kieser T, Chater KF (2004). "SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2)." Mol Microbiol 51(6);1615-28. PMID: 15009889

Borodina05: Borodina I, Krabben P, Nielsen J (2005). "Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism." Genome Res 15(6);820-9. PMID: 15930493

Kanehisa00: Kanehisa M, Goto S (2000). "KEGG: kyoto encyclopedia of genes and genomes." Nucleic Acids Res 28(1);27-30. PMID: 10592173

Kanehisa97: Kanehisa M (1997). "A database for post-genome analysis." Trends Genet 13(9);375-6. PMID: 9287494

SRI05: SRI International (2005). "BioCyc and Pathway Tools Publications." BioCyc Database Collection.


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Please cite the following article in publications resulting from the use of this database: Nature, 417(6885):141 2002
Page generated by SRI International Pathway Tools version 11.5 on Sun Aug 1, 2010.

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